Abschlussarbeiten

„Unveiling CNN Layer Contributions: Application of Feature Visualization in Medical Image Classification Tasks” - Jonida Mukaj

Autor: Jonida Mukaj, betreut von Ines Rieger

This thesis explores the application of feature visualisations on medical datasets, specifically for skin cancer imaging, using pre-trained convolutional neural networks like AlexNet, VGG16, and ResNet50 to enhance model interpretability, and fine-tuning those models to the ISIC benchmark dataset. Comparative analysis of ISIC 2019 and 2020 datasets shows varying model strengths, with VGG16 leading in accuracy and ResNet50 generalizability. Feature visualizations reveal diagnostic patterns in skin cancer, aiding in understanding network decision-making, yet pose challenges in medical interpretation. The study underscores the importance of deep learning in medical imaging and suggests combining feature visualizations with other interpretability techniques for future advancements.

Link to thesis(17.2 MB)

‚‚Exploring and Evaluating Deep Hashing Methods within Vision Foundation Model Feature Spaces for Similarity Search and Privacy Preservation’’ - Peiyao Mao

Autor: Peiyao Mao, betreut von Francesco Di Salvo

This thesis investigates the efficacy of deep hashing methods applied to image embeddings derived from state-of-the-art Vision Transformer (ViT) models, focusing on both the semantic preservation be tween original image embeddings and hashed image embeddings and the strengthening of data privacy. The contribution of the experiment involves the transformation of image embeddings to hashed image embeddings using various deep supervised hashing methods, making sure the semantic similarities are preserved, and data privacy is enhanced. We innovatively apply Triplet Center Loss (TCL) in the domain of deep hashing, aiming to achieve both high performance and computational efficiency. By comparing various deep supervised hashing methods, including pairwise and triplet methods, the experiment try to understand and evaluate how different approaches perform under the same conditions. It provides insights into which methods are most effective in retaining important data characteristics after hashing. A key aspect of this research is the emphasis on privacy preservation. By converting raw image data into hashed forms, this work explores how advanced hashing techniques can obscure original data features, thereby enhancing privacy without substantially compromising the utility for tasks such as medical image retrieval. This dual focus addresses the critical challenge of using sensitive image data in environments where privacy concerns are important.

Link to thesis(2.7 MB)

„Generative Data Augmentation in the Embedding Space of Vision Foundation Models to Address Long-Tailed Learning and Privacy Constraints” - David Elias Tafler

Autor: David Elias Tafler, betreut von Francesco Di Salvo

This thesis explores the potential of generative data augmentation in the embedding space of vision foundation models, aiming to address the challenges of long-tailed learning and privacy constraints. Our work leverages Conditional Variational Autoencoders (CVAEs) to enrich the representation space for underrepresented classes in highly imbalanced datasets and to enhance data privacy without compromising utility. We develop and assess methods that generate synthetic data embeddings conditioned on class labels, which both mimic the distribution of original data for privacy purposes and augment data for tail classes to balance datasets. Our methodology shows that embedding-based augmentation can effectively improve classification accuracy in long-tailed scenarios by increasing the diversity and volume of minor class samples. Additionally, we demonstrate that our approach can generate data that maintains privacy through effective anonymization of embeddings. The outcomes suggest that generative augmentation in embedding spaces of foundation models offers a promising avenue for enhancing model robustness and data security in practical applications. The findings have significant implications for deploying machine learning models in sensitive domains, where data imbalance and privacy are critical concerns.

Link to thesis(8.8 MB)

"Development of a dataset and AI-based proof-of-concept algorithm for the classification of digitized whole slide images of gastric tissue"- Tom Hempel

Autor: Tom Hempel, betreut von Prof. Dr. Christian Ledig

The thesis focuses on the development of a dataset and AI algorithms for classifying digitized whole slide images (WSIs) of gastric tissue. It details the creation and meticulous annotation of the dataset, which is crucial for effectively training the AI. The process involved gathering, anonymizing, and annotating a vast array of WSIs, aimed at building robust AI models that can accurately classify different regions of the stomach and identify inflammatory conditions.

Two AI models were developed, one for assessing gastric regions and another for inflammation detection, achieving high accuracy in areas like the antrum and corpus but facing challenges with intermediate regions due to dataset limitations and the specificity of training samples.

The challenges encountered during the dataset creation, such as data collection and the necessity for detailed annotation to ensure data integrity and privacy, highlight the complexity of this research.

The dataset and initial models serve as a foundation for further research by Philipp Andreas Höfling in his master thesis, aiming to refine these AI algorithms and enhance their utility in medical diagnostics.

Link to thesis(5.1 MB)